Below is the list of research publications for the School of Biomolecular and Biomedical Science in the academic year 2023/2024.
Dr Emmanuel Reynaud | |
Reynaud, E. G., & Tomancák, P. (2024). Light Sheet Fluorescence Microscopy. |
Professor Cormac Murphy | |
Khan, M. F., Hof, C., Niemcova, P., & Murphy, C. D. (2024). Biotransformation of fluorinated drugs and xenobiotics by the model fungus Cunninghamella elegans. In Methods in Enzymology (Vol. 696, pp. 251-285). doi:10.1016/bs.mie.2023.12.016 - Available Online |
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Dr Emmanuel Reynaud | |
Bergter, A., Lippert, H., Launay, G., Haas, P., Koester, I., Laissue, P. P., et al. (2024). Commercial and Open-Source Systems. In Light Sheet Fluorescence Microscopy (pp. 149-202). |
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Marcello, M., Accardi, D., Bundshuch, S., Oegema, J., Andreev, A., Reynaud, E. G., & Peychl, J. (2024). Light-Sheet Microscopy Technology in the Multiuser Environment of a Core Imaging Facility – Practical Considerations. In Light Sheet Fluorescence Microscopy (pp. 365-382). |
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Tomancák, P., & Reynaud, E. G. (2024). Let There be Light Sheet. In Light Sheet Fluorescence Microscopy (pp. 1-10). |
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Reynaud, E. G., Peychl, J., & Tomancák, P. (2024). How to Organize a Practical Course on Light Sheet Microscopy. In Light Sheet Fluorescence Microscopy (pp. 345-364). |
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Pampaloni, F., Lachica, E., Paysan, J., & Reynaud, E. G. (2024). A Small Guide on How to Mount a Sample in a Light-Sheet Microscope. In Light Sheet Fluorescence Microscopy (pp. 67-100). |
Professor Annette Therese Byrne | |
Rafsanjani, M. R., Dooney, A., Suresh, R., O’Farrell, A. C., Jarzabek, M. A., Shiels, L., et al. (2024). Using Shapley additive explanations and saliency for interpretation of multiclass classification of PDX spectral data with deep neural networks. In Proceedings of SPIE - The International Society for Optical Engineering Vol. 13011. doi:10.1117/12.3022370 - Available Online |
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Professor William Gallagher | |
Suresh, R., Nguyen, T. N. Q., Bouzy, P., Stone, N., Jirstrom, K., Rahman, A., et al. (2024). Entropy-based spatial heterogeneity analysis in pathological images for diagnostic applications. In Proceedings of SPIE - The International Society for Optical Engineering Vol. 13011. doi:10.1117/12.3022363 - Available Online |
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Rafsanjani, M. R., McBrien, T., Jirstrom, K., Rahman, A., Prehn, J. H. M., Gallagher, W., & Meade, A. D. (2024). Preliminary evaluation of an automated autoencoder-UNet pipeline for chemical image segmentation and compression with reference to serial ground truth pathology. In Proceedings of SPIE - The International Society for Optical Engineering Vol. 13011. doi:10.1117/12.3022279 - Available Online |
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Rafsanjani, M. R., Jirstrom, K., Rahman, A., Prehn, J. H. M., Gallagher, W., & Meade, A. D. (2024). Fusion and integration pipelines for optical and chemical imaging data for clinical interpretation in ex-vivo diagnosis. In Proceedings of SPIE - The International Society for Optical Engineering Vol. 13011. doi:10.1117/12.3022269 - Available Online |
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Professor Patricia Maguire | |
Cullivan, S., Mccormack, C., Mccullagh, B., Kevane, B., Maguire, P., Niainle, F., & Gaine, S. (2023). Calibrated automated thrombography demonstrates a hypocoagulable profile in subjects with pulmonary arterial hypertension. In Pulmonary hypertension (pp. PA5178). European Respiratory Society. doi:10.1183/13993003.congress-2023.pa5178 - Available Online |
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Dr Jennifer Mitchell | |
Corbet, A., & Mitchell, J. (2024). What factors are driving bacterial colon tumor invasion? The role of cyclic adenosine monophosphate in Streptococcus gallolyticus colon cell invasion.. In Microbiology Society Annual Conference. Edinburgh UK. |
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Ralph, A., & Mitchell, J. (2024). A sweet tooth: Does twitching motility in the absence of sugar determine tumour invasion by gut streptococci?. In Microbiology Society Annual Conference 2024 (pp. 519). Edinburgh UK. |
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Assoc Professor Tadhg Ó'Cróinín | |
Oubihi, S., Clyne, M., & Ó'Cróinín, T. (2024). Phenotypic characterization of the effect of fluoroquinolone resistance on Campylobacter Jejuni. In Microbiology Society Annual Conference. |
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O'Gorman, E., Clyne, M., & Ó'Cróinín, T. (2024). The effects of environmental stresses on Campylobacter jejuni biofilm formation. In Microbiology Society Annual Conference 2024. |
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Turner, A., Zermeño Pérez, D., Mysior, M., Giraldo-Osorno, P. M., García, B., O'Gorman, E., et al. (2024). Modulation of methicillin-resistant Staphylococcus aureus biofilm formation by PEGylated-PDLLA-coated titanium. In World Biomaterials Congress 2024. Daegu, South Korea. |
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Zermeño Pérez, D., Chouirfa, H., Rodriguez, B., Ó'Cróinín, T., Duffy, P., & Dürig, T. (2024). Antifouling and antimicrobial bioresorbable coatings for protection of titanium-based implantable medical devices. In World Biomaterials Congress 2024. Daegu, Korea. |
Ms Cristina Bauset | |
Seco-Cervera, M., Ortiz-Masiá, D., Macias-Ceja, D. C., Coll, S., Gisbert-Ferrándiz, L., Cosín-Roger, J., et al. (2024). Resistance to apoptosis in complicated Crohn's disease: Relevance in ileal fibrosis.. Biochimica et biophysica acta. Molecular basis of disease, 1870(2), 166966. doi:10.1016/j.bbadis.2023.166966 - Available Online |
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Dr Despina Bazou | |
Tsallos, D., Ikonen, N., Miettinen, J., Majumder, M. M., Eldfors, S., Parsons, A., et al. (2023). P-374 Stratifying multiple myeloma patients for personalized therapy based on TP53 mutation, deletion, and drug response profiles. Clinical Lymphoma Myeloma and Leukemia, 23, S246. doi:10.1016/s2152-2650(23)01992-4 - Available Online |
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Katsenou, A., O’Farrell, R., Dowling, P., Heckman, C. A., O’Gorman, P., & Bazou, D. (2023). Using Proteomics Data to Identify Personalized Treatments in Multiple Myeloma: A Machine Learning Approach. International Journal of Molecular Sciences, 24(21). doi:10.3390/ijms242115570 - Available Online |
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Kulkarni, A., Bazou, D., & Santos-Martinez, M. J. (2023). Bleeding and Thrombosis in Multiple Myeloma: Platelets as Key Players during Cell Interactions and Potential Use as Drug Delivery Systems. International Journal of Molecular Sciences, 24(21). doi:10.3390/ijms242115855 - Available Online |
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Sheridan, R., Brennan, K., Bazou, D., O’Gorman, P., Matallanas, D., & Mc Gee, M. M. (2024). Multiple Myeloma Derived Extracellular Vesicle Uptake by Monocyte Cells Stimulates IL-6 and MMP-9 Secretion and Promotes Cancer Cell Migration and Proliferation. Cancers, 16(5). doi:10.3390/cancers16051011 - Available Online |
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Bazou, D., & Dowling, P. (2024). Editorial: Multiple Myeloma: Molecular Mechanism and Targeted Therapy. International Journal of Molecular Sciences, 25(7). doi:10.3390/ijms25073799 - Available Online |
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Professor Oliver Blacque | |
Moran, A. L., Fehilly, J. D., Blacque, O., & Kennedy, B. N. (2023). Gene therapy for RAB28: What can we learn from zebrafish?. Vision Research, 210. doi:10.1016/j.visres.2023.108270 - Available Online |
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Moran, A. L., Louzao-Martinez, L., Norris, D. P., Peters, D. J. M., & Blacque, O. E. (2024). Transport and barrier mechanisms that regulate ciliary compartmentalization and ciliopathies. Nature Reviews Nephrology, 20(2), 83-100. doi:10.1038/s41581-023-00773-2 - Available Online |
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Pir, M. S., Begar, E., Yenisert, F., Demirci, H. C., Korkmaz, M. E., Karaman, A., et al. (2024). CilioGenics: an integrated method and database for predicting novel ciliary genes. Nucleic Acids Research, 52(14), 8127-8145. doi:10.1093/nar/gkae554 - Available Online |
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Dr Gary Brennan | |
de Diego-Garcia, L., Brennan, G. P., Auer, T., Menendez-Mendez, A., Parras, A., Martin-Gil, A., et al. (2023). CPEB4–CLOCK crosstalk during temporal lobe epilepsy. Epilepsia, 64(10), 2827-2840. doi:10.1111/epi.17736 - Available Online |
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How Lau, K. E., Nguyen, N. T., Kesavan, J. C., Langa, E., Fanning, K., Brennan, G. P., et al. (2024). Differential microRNA editing may drive target pathway switching in human temporal lobe epilepsy. Brain Communications, 6(1). doi:10.1093/braincomms/fcad355 - Available Online |
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Dr Kieran Brennan | |
García-Posadas, L., Romero-Castillo, I., Brennan, K., McGee, M. M., Blanco-Fernández, A., & Diebold, Y. (2023). Isolation and Characterization of Human Conjunctival Mesenchymal Stromal Cells and Their Extracellular Vesicles. Investigative Ophthalmology and Visual Science, 64(12). doi:10.1167/iovs.64.12.38 - Available Online |
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Welsh, J. A., Goberdhan, D. C. I., O’Driscoll, L., Buzas, E. I., Blenkiron, C., Bussolati, B., et al. (2024). Minimal information for studies of extracellular vesicles (MISEV2023): From basic to advanced approaches. Journal of Extracellular Vesicles, 13(2). doi:10.1002/jev2.12404 - Available Online |
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Sheridan, R., Brennan, K., Bazou, D., O’Gorman, P., Matallanas, D., & Mc Gee, M. M. (2024). Multiple Myeloma Derived Extracellular Vesicle Uptake by Monocyte Cells Stimulates IL-6 and MMP-9 Secretion and Promotes Cancer Cell Migration and Proliferation. Cancers, 16(5). doi:10.3390/cancers16051011 - Available Online |
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Professor Geraldine Butler | |
Daneshnia, F., Floyd, D. J., Ryan, A. P., Ghahfarokhy, P. M., Ebadati, A., Jusuf, S., et al. (2024). Evaluation of outbreak persistence caused by multidrug-resistant and echinocandin-resistant Candida parapsilosis using multidimensional experimental and epidemiological approaches. Emerging Microbes and Infections, 13(1). doi:10.1080/22221751.2024.2322655 - Available Online |
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Zhai, B., Liao, C., Jaggavarapu, S., Tang, Y., Rolling, T., Ning, Y., et al. (2024). Antifungal heteroresistance causes prophylaxis failure and facilitates breakthrough Candida parapsilosis infections. Nature Medicine. doi:10.1038/s41591-024-03183-4 - Available Online |
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Ryan, A. P., Groenewald, M., Smith, M. T., Holohan, C., Boekhout, T., Wolfe, K. H., & Butler, G. (2024). Genome Analysis of a Newly Discovered Yeast Species, Hanseniaspora menglaensis. Journal of Fungi, 10(3). doi:10.3390/jof10030180 - Available Online |
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Heneghan, P. G., Ryan, A. P., Cinnéide, E., Davies, J., Bracken, C., Ogundipe, V., et al. (2024). Draft genome sequence of the yeast Schwanniomyces capriottii strain UCD805, isolated from soil in Ireland. Microbiology Resource Announcements, 13(3). doi:10.1128/mra.01073-23 - Available Online |
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McLaughlin, R. W., Hession, C., Bergin, S., Cosgrove, A., Dowd, A., Garvey, N., et al. (2024). Genome sequences of two isolates of the yeast Candida zeylanoides: UCD849 from soil in Ireland, and AWD from an African wild dog. Microbiology Resource Announcements, 13(3). doi:10.1128/mra.01081-23 - Available Online |
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Bergin, S., Doorley, L. A., Rybak, J. M., Wolfe, K. H., Butler, G., Cuomo, C. A., & Rogers, P. D. (2024). Analysis of clinical Candida parapsilosis isolates reveals copy number variation in key fluconazoleresistance genes. Antimicrobial Agents and Chemotherapy, 68(6). doi:10.1128/aac.01619-23 - Available Online |
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Wickramasinghe, D. N., Lyon, C. M., Lee, S., Hepworth, O. W., Priest, E. L., Maufrais, C., et al. (2024). Variations in candidalysin amino acid sequence influence toxicity and host responses. mBio, 15(8). doi:10.1128/mbio.03351-23 - Available Online |
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Professor Annette Therese Byrne | |
Ntafoulis, I., Kleijn, A., Ju, J., Jimenez-Cowell, K., Fabro, F., Klein, M., et al. (2023). Ex vivo drug sensitivity screening predicts response to temozolomide in glioblastoma patients and identifies candidate biomarkers. British Journal of Cancer, 129(8), 1327-1338. doi:10.1038/s41416-023-02402-y - Available Online |
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Fabro, F., Kers, T. V., Feller, K. J., Beerens, C., Ntafoulis, I., Idbaih, A., et al. (2023). Genomic Exploration of Distinct Molecular Phenotypes Steering Temozolomide Resistance Development in Patient-Derived Glioblastoma Cells. International Journal of Molecular Sciences, 24(21). doi:10.3390/ijms242115678 - Available Online |
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Teo, Z. L., O’Connor, M. J., Versaci, S., Clarke, K. A., Brown, E. R., Percy, L. W., et al. (2023). Combined PARP and WEE1 inhibition triggers anti-tumor immune response in BRCA1/2 wildtype triple-negative breast cancer. npj Breast Cancer, 9(1). doi:10.1038/s41523-023-00568-5 - Available Online |
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Connor, K., Golebiewska, A., & Byrne, A. T. (2024). Challenging the status quo to improve the translational potential of preclinical oncology studies. Nature Reviews Cancer. doi:10.1038/s41568-024-00756-w - Available Online |
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Prior, O., Macarro, C., Navarro, V., Monreal, C., Ligero, M., Garcia-Ruiz, A., et al. (2024). Identification of Precise 3D CT Radiomics for Habitat Computation by Machine Learning in Cancer. Radiology: Artificial Intelligence, 6(2). doi:10.1148/ryai.230118 - Available Online |
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Prior, O., Macarro, C., Navarro, V., Monreal, C., Ligero, M., Garcia-Ruiz, A., et al. (2024). Erratum for: Identification of Precise 3D CT Radiomics for Habitat Computation by Machine Learning in Cancer (Radiology: Artificial Intelligence 2024;6(2) https://doi.org/10.1148/ryai.230118). Radiology: Artificial Intelligence, 6(3). doi:10.1148/ryai.249001 - Available Online |
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Brown, K. H., Kerr, B. N., Pettigrew, M., Connor, K., Miller, I. S., Shiels, L., et al. (2024). A comparative analysis of preclinical computed tomography radiomics using cone-beam and micro-computed tomography scanners. Physics and Imaging in Radiation Oncology, 31. doi:10.1016/j.phro.2024.100615 - Available Online |
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Dr Patrick Caffrey | |
Cowen, T., Walmsley, S., Karim, K., Haser, R., Caffrey, P., Piletska, E., et al. (2023). A Biomimetic Polymer for the Extraction and Purification of Superior Analogues of Amphotericin B. Biomimetics, 8(3). doi:10.3390/biomimetics8030273 - Available Online |
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Hogan, M., Song, Y., Muldoon, J., & Caffrey, P. (2024). Generation of New Glycoanalogues of Polyene Antibiotics by Synthetic Biology—Testing Current Technical Boundaries. SynBio, 2(1), 31-55. doi:10.3390/synbio2010003 - Available Online |
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Song, Y., Hogan, M., Muldoon, J., Evans, P., & Caffrey, P. (2024). Characterisation of Modular Polyketide Synthases Designed to Make Pentaene Analogues of Amphotericin B. Molecules, 29(6). doi:10.3390/molecules29061396 - Available Online |
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Assoc Professor Gerard Cagney | |
Zaiatz-Bittencourt, V., Jones, F., Tosetto, M., Scaife, C., Cagney, G., Jones, E., et al. (2023). Butyrate limits human natural killer cell effector function. Scientific Reports, 13(1). doi:10.1038/s41598-023-29731-5 - Available Online |
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Healy, C., Byrne, J., Raj Suasi, S., Föcking, M., Mongan, D., Kodosaki, E., et al. (2024). Differential expression of haptoglobin in individuals at clinical high risk of psychosis and its association with global functioning and clinical symptoms. Brain, Behavior, and Immunity, 117, 175-180. doi:10.1016/j.bbi.2023.12.018 - Available Online |
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Byrne, J. F., Healy, C., Föcking, M., Susai, S. R., Mongan, D., Wynne, K., et al. (2024). Proteomic Biomarkers for the Prediction of Transition to Psychosis in Individuals at Clinical High Risk: A Multi-cohort Model Development Study. Schizophrenia Bulletin, 50(3), 579-588. doi:10.1093/schbul/sbad184 - Available Online |
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Kelly, S., Tham, J. L., McKeever, K., Dillon, E., O’Connell, D., Scholz, D., et al. (2024). Comprehensive Proteomics Analysis of Polyhydroxyalkanoate (PHA) Biology in Pseudomonas putida KT2440: The Outer Membrane Lipoprotein OprL is a Newly Identified Phasin. Molecular and Cellular Proteomics, 23(5). doi:10.1016/j.mcpro.2024.100765 - Available Online |
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Oliviero, G., Wynne, K., Andrews, D., Crean, J., Kolch, W., & Cagney, G. (2024). Expression Proteomics and Histone Analysis Reveal Extensive Chromatin Network Changes and a Role for Histone Tail Trimming during Cellular Differentiation. Biomolecules, 14(7). doi:10.3390/biom14070747 - Available Online |
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Dr Federico Cerrone | |
Cerrone, F., Zhou, B., Mouren, A., Avérous, L., Conroy, S., Simpson, J. C., et al. (2023). Pseudomonas umsongensis GO16 as a platform for the in vivo synthesis of short and medium chain length polyhydroxyalkanoate blends. Bioresource Technology, 387. doi:10.1016/j.biortech.2023.129668 - Available Online |
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Dr Colm Collins | |
Collins, C. B., Nguyen, T. T., Leddy, R. S., Alula, K. M., Yeckes, A. R., Strassheim, D., et al. (2024). Heat shock factor 1 drives regulatory T-cell induction to limit murine intestinal inflammation. Mucosal Immunology, 17(1), 94-110. doi:10.1016/j.mucimm.2023.11.003 - Available Online |
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Ms Patrizia Colucci | |
Piano, I., Votta, A., Colucci, P., Corsi, F., Vitolo, S., Cerri, C., et al. (2023). Anti-inflammatory reprogramming of microglia cells by metabolic modulators to counteract neurodegeneration; a new role for Ranolazine. Scientific Reports, 13(1). doi:10.1038/s41598-023-47540-8 - Available Online |
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Dr Derek Costello | |
Pinki, F., Costello, D. A., & Stewart, G. (2023). Regional investigation of UT-B urea transporters in the rat brain. Biochemistry and Biophysics Reports, 36. doi:10.1016/j.bbrep.2023.101563 - Available Online |
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Assoc Professor John Crean | |
Krupa, I., Treacy, N. J., Clerkin, S., Davis, J. L., Miller, A. F., Saiani, A., et al. (2024). Protocol for the Growth and Maturation of hiPSC-Derived Kidney Organoids using Mechanically Defined Hydrogels. Current Protocols, 4(7). doi:10.1002/cpz1.1096 - Available Online |
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Oliviero, G., Wynne, K., Andrews, D., Crean, J., Kolch, W., & Cagney, G. (2024). Expression Proteomics and Histone Analysis Reveal Extensive Chromatin Network Changes and a Role for Histone Tail Trimming during Cellular Differentiation. Biomolecules, 14(7). doi:10.3390/biom14070747 - Available Online |
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Dr Jessica Davis | |
Krupa, I., Treacy, N. J., Clerkin, S., Davis, J. L., Miller, A. F., Saiani, A., et al. (2024). Protocol for the Growth and Maturation of hiPSC-Derived Kidney Organoids using Mechanically Defined Hydrogels. Current Protocols, 4(7). doi:10.1002/cpz1.1096 - Available Online |
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Dr Monica De Gaetano | |
Rago, F., Melo, E. M., Miller, L. M., Duray, A. M., Batista Felix, F., Vago, J. P., et al. (2024). Treatment with lipoxin A<inf>4</inf> improves influenza A infection outcome, induces macrophage reprogramming, anti-inflammatory and pro-resolutive responses. Inflammation Research. doi:10.1007/s00011-024-01939-9 - Available Online |
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Conroy, L. J., McCann, A., Zhang, N., & de Gaetano, M. (2024). The role of nanosystems in the delivery of glucose-lowering drugs for the preemption and treatment of diabetes-associated atherosclerosis. American Journal of Physiology - Cell Physiology, 326(5), C1398-C1409. doi:10.1152/ajpcell.00695.2023 - Available Online |
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Professor William Gallagher | |
O’Reilly, E., Khalifa, K., Cosgrave, J., Azam, H., Prencipe, M., Simpson, J. C., et al. (2023). Cannabidiol Inhibits the Proliferation and Invasiveness of Prostate Cancer Cells. Journal of Natural Products, 86(9), 2151-2161. doi:10.1021/acs.jnatprod.3c00363 - Available Online |
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Krzyzanowska, A., Barron, S., Higgins, D. F., Loughman, T., O'Neill, A., Sheehan, K. M., et al. (2023). Development, Validation, and Clinical Utility of a Six-gene Signature to Predict Aggressive Prostate Cancer. European Urology Focus, 9(6), 983-991. doi:10.1016/j.euf.2023.04.004 - Available Online |
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Lawler, M., Sullivan, R., Abou-Alfa, G. K., McCloskey, K., Keatley, D., Feighan, J., et al. (2023). Health diplomacy in action: The cancer legacy of the Good Friday Agreement. Journal of Cancer Policy, 38. doi:10.1016/j.jcpo.2023.100448 - Available Online |
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McCaffrey, C., Jahangir, C., Murphy, C., Burke, C., Gallagher, W. M., & Rahman, A. (2024). Artificial intelligence in digital histopathology for predicting patient prognosis and treatment efficacy in breast cancer. Expert Review of Molecular Diagnostics, 24(5), 363-377. doi:10.1080/14737159.2024.2346545 - Available Online |
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Tuzova, A. V., Moran, B., Russell, N. M., Das, S., Delahaye, F., Silva, R., et al. (2024). Deciphering epigenetic regulation of enhancers in high-risk prostate cancer. Genes Chromosomes and Cancer, 63(2). doi:10.1002/gcc.23218 - Available Online |
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Jahangir, C. A., Page, D. B., Broeckx, G., Gonzalez, C. A., Burke, C., Murphy, C., et al. (2024). Image-based multiplex immune profiling of cancer tissues: translational implications. A report of the International Immuno-oncology Biomarker Working Group on Breast Cancer. Journal of Pathology, 262(3), 271-288. doi:10.1002/path.6238 - Available Online |
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Gao, B., Ward, E., Blümel, A., Conroy, E., Moore, R., Cremin, G., et al. (2024). Abstract PO3-18-08: Rational therapeutic combination of Bromodomain and Extra-Terminal domain (BET) inhibitor and Fibroblast Growth Factor Receptor (FGFR) inhibitor for treatment of invasive lobular carcinoma. Cancer Research, 84(9_Supplement). doi:10.1158/1538-7445.sabcs23-po3-18-08 - Available Online |
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Kinsella, Z., Nyarko, H., Blümel, A., Lucas, M., Kalinska-Lysiak, D., Gonzalez, C. A., et al. (2024). Abstract PS16-10: SPATIAL IMMUNE CELL DISTRIBUTION CAN REFINE PROGNOSIS IN EARLY-STAGE ER+/HER2-/LN- BREAST CANCER. Cancer Research, 84(9_Supplement). doi:10.1158/1538-7445.sabcs23-ps16-10 - Available Online |
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Moore, R., Blümel, A., Ward, E., Sainsbury, E., Conroy, E., O’Brien, F., et al. (2024). Abstract PO2-24-04: Exploring the role and therapeutic potential of Ubiquitin Specific Peptidase 11 (USP11) in estrogen receptor positive breast cancer. Cancer Research, 84(9_Supplement). doi:10.1158/1538-7445.sabcs23-po2-24-04 - Available Online |
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Walsh, M., Jordan, A., Schäfer, L., Joha, J., Heapes, B., Noonan, M., et al. (2024). IMPROVER (Involving Men with Prostate Cancer in Engaged Research): Assessing Patient Experience With Testing, Diagnosis, And Surveillance. Clinical Genitourinary Cancer, 22(3). doi:10.1016/j.clgc.2024.102063 - Available Online |
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Dr Jana Haase | |
Kalinichenko, L. S., Kornhuber, J., Sinning, S., Haase, J., & Müller, C. P. (2024). Serotonin Signaling through Lipid Membranes. ACS Chemical Neuroscience, 15(7), 1298-1320. doi:10.1021/acschemneuro.3c00823 - Available Online |
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Dr Rebecca Henry | |
Makarava, N., Mychko, O., Molesworth, K., Chang, J. C. Y., Henry, R. J., Tsymbalyuk, N., et al. (2023). Region-Specific Homeostatic Identity of Astrocytes Is Essential for Defining Their Response to Pathological Insults. Cells, 12(17). doi:10.3390/cells12172172 - Available Online |
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Barrett, J. P., Aubrecht, T. G., Smith, A., Vaida, M., Henry, R. J., Doran, S. J., et al. (2024). Molecular Pathway Changes Associated with Different Post-Conditioning Exercise Interventions After Experimental TBI. Journal of Neurotrauma. doi:10.1089/neu.2024.0120 - Available Online |
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Eagle, S. R., & Henry, R. J. (2024). Applying Dynamical Systems Theory to Improve Personalized Medicine Following Mild Traumatic Brain Injury. Neurotrauma Reports, 5(1), 671-679. doi:10.1089/neur.2024.0040 - Available Online |
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Dr David Hughes | |
Hughes, D. J., Schomburg, L., Jenab, M., Biessy, C., Méplan, C., Moskal, A., et al. (2023). Prediagnostic selenium status, selenoprotein gene variants and association with breast cancer risk in a European cohort study. Free Radical Biology and Medicine, 209, 381-393. doi:10.1016/j.freeradbiomed.2023.10.401 - Available Online |
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Galati, L., Gupta, P., Tufaro, A., Marinaro, M., Saponaro, C., Escobar Marcillo, D. I., et al. (2023). Evaluation of human papillomavirus DNA in colorectal cancer and adjacent mucosal tissue samples. Infectious Agents and Cancer, 18(1). doi:10.1186/s13027-023-00552-5 - Available Online |
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Papadimitriou, N., Bull, C. J., Jenab, M., Hughes, D. J., Bell, J. A., Sanderson, E., et al. (2023). Separating the effects of early and later life adiposity on colorectal cancer risk: a Mendelian randomization study. BMC Medicine, 21(1). doi:10.1186/s12916-022-02702-9 - Available Online |
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Alexander, J. L., Posma, J. M., Scott, A., Poynter, L., Mason, S. E., Doria, M. L., et al. (2023). Pathobionts in the tumour microbiota predict survival following resection for colorectal cancer. Microbiome, 11(1). doi:10.1186/s40168-023-01518-w - Available Online |
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Mandle, H. B., Jenab, M., Gunter, M. J., Tjønneland, A., Olsen, A., Dahm, C. C., et al. (2024). Inflammation and Gut Barrier Function-Related Genes and Colorectal Cancer Risk in Western European Populations.. Mutagenesis, geae008. doi:10.1093/mutage/geae008 - Available Online |
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Rayman, M. P., Schomburg, L., Zhang, J., Taylor, E. W., Du Laing, G., Beck, M., et al. (2024). Comment on Ambra et al. Could Selenium Supplementation Prevent COVID-19? A Comprehensive Review of Available Studies. Molecules 2023, 28, 4130. Molecules, 29(11). doi:10.3390/molecules29112466 - Available Online |
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Professor Breandán Kennedy | |
Moran, A. L., Fehilly, J. D., Blacque, O., & Kennedy, B. N. (2023). Gene therapy for RAB28: What can we learn from zebrafish?. Vision Research, 210. doi:10.1016/j.visres.2023.108270 - Available Online |
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Swords, E., Kennedy, B. N., & Tonelotto, V. (2024). Assessment of ferroptosis as a promising candidate for metastatic uveal melanoma treatment and prognostication. Frontiers in Pharmacology, 15. doi:10.3389/fphar.2024.1466896 - Available Online |
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Professor Patricia Maguire | |
Kenny, M., Shukla, R., Weiss, L., Fouhy, E., Murphy, C., Ní Áinle, F., et al. (2023). PB1520 Deep Learning Extracts Embedded Signatures Associated with Pregnancy and Preeclampsia from Circulating Vesicle Profiles. Research and Practice in Thrombosis and Haemostasis, 7, 101948. doi:10.1016/j.rpth.2023.101948 - Available Online |
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Kelliher, S., Gamba, S., Weiss, L., Marchetti, M., Schieppati, F., Ní Áinle, F., et al. (2023). OC 56.1 Platelets as Versatile Effectors of Thromboinflammation: An MPN Multi-Omics Collaborative. Research and Practice in Thrombosis and Haemostasis, 7, 100485. doi:10.1016/j.rpth.2023.100485 - Available Online |
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Weiss, L., Szklanna, P., Kelliher, S., Wynne, K., Blanco, A., O’Doherty, A., et al. (2023). OC 16.5 Rivaroxaban in Combination with Low-Dose Aspirin is Associated with a Reduction in Pro-Inflammatory and Pro-thrombotic Circulating Vesicle Signatures in Patients with Cardiovascular Disease. Research and Practice in Thrombosis and Haemostasis, 7, 100305. doi:10.1016/j.rpth.2023.100305 - Available Online |
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Sigle, M., Rohlfing, A. K., Kenny, M., Scheuermann, S., Sun, N., Graeßner, U., et al. (2023). Translating genomic tools to Raman spectroscopy analysis enables high-dimensional tissue characterization on molecular resolution. Nature Communications, 14(1). doi:10.1038/s41467-023-41417-0 - Available Online |
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Weiss, L., O'Doherty, A., Uhrig, W., Szklanna, P. B., Hong-Minh, M., Wynne, K., et al. (2024). Rivaroxaban, in combination with low-dose aspirin, is associated with a reduction in proinflammatory and prothrombotic circulating vesicle signatures in patients with cardiovascular disease. Journal of Thrombosis and Haemostasis. doi:10.1016/j.jtha.2024.09.030 - Available Online |
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Weiss, L., Macleod, H., & Maguire, P. B. (2024). Platelet-derived extracellular vesicles in cardiovascular disease and treatment - From maintaining homeostasis to targeted drug delivery. Current Opinion in Hematology. doi:10.1097/MOH.0000000000000845 - Available Online |
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Mc Mahon, A., Weiss, L., Bennett, K., Curley, G., Ní Ainle, F., & Maguire, P. (2024). Extracellular vesicles in disorders of hemostasis following traumatic brain injury. Frontiers in Neurology, 15. doi:10.3389/fneur.2024.1373266 - Available Online |
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O’Reilly, D., Murphy, C. A., Moore, C. M., Ní Áinle, F., Gormley, I. C., Morrell, C. N., et al. (2024). Markers of platelet activation foR identification of late onset sEpsis in infaNTs: PARENT study protocol. Pediatric Research, 95(3), 852-856. doi:10.1038/s41390-023-02812-x - Available Online |
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Macleod, H., Weiss, L., Kelliher, S., Kevane, B., Áinle, F. N., & Maguire, P. B. (2024). The effect of UVA light/8-methoxypsoralen exposure used in Extracorporeal Photopheresis treatment on platelets and extracellular vesicles. PLoS ONE, 19(2 February). doi:10.1371/journal.pone.0293687 - Available Online |
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Weiss, L., Uhrig, W., Kelliher, S., Szklanna, P. B., Prendiville, T., Comer, S. P., et al. (2024). Proteomic analysis of extracellular vesicle cargoes mirror the cardioprotective effects of rivaroxaban in patients with venous thromboembolism. Proteomics - Clinical Applications, 18(4). doi:10.1002/prca.202300014 - Available Online |
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Kelliher, S., Gamba, S., Weiss, L., Shen, Z., Marchetti, M., Schieppati, F., et al. (2024). Platelet proteomic profiling reveals potential mediators of immunothrombosis and proteostasis in myeloproliferative neoplasms. Blood Advances, 8(16), 4276-4280. doi:10.1182/bloodadvances.2023012016 - Available Online |
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Dr Mario Manresa | |
Matellan, C., Kennedy, C., Santiago-Vela, M. I., Hochegger, J., Ní Chathail, M. B., Wu, A., et al. (2024). The TNFSF12/TWEAK Modulates Colonic Inflammatory Fibroblast Differentiation and Promotes Fibroblast-Monocyte Interactions. Journal of Immunology, 212(12), 1958-1970. doi:10.4049/jimmunol.2300762 - Available Online |
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Dr Niamh Martin | |
Nolan, T. M., Sala-Comorera, L., Reynolds, L. J., Martin, N. A., Stephens, J. H., O'Hare, G. M. P., et al. (2023). Bacteriophages from faecal contamination are an important reservoir for AMR in aquatic environments. Science of the Total Environment, 900. doi:10.1016/j.scitotenv.2023.165490 - Available Online |
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Nolan, T. M., Martin, N. A., Reynolds, L. J., Sala-Comorera, L., O'Hare, G. M. P., O'Sullivan, J. J., & Meijer, W. G. (2024). Agricultural and urban practices are correlated to changes in the resistome of riverine systems. Science of the Total Environment, 927. doi:10.1016/j.scitotenv.2024.172261 - Available Online |
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Martin, N. A., Reynolds, L. J., Sala-Comorera, L., Nolan, T. M., Stephens, J. H., Gitto, A., et al. (2024). Quantitative source apportionment of faecal indicator bacteria from anthropogenic and zoogenic sources of faecal contamination. Marine Pollution Bulletin, 205. doi:10.1016/j.marpolbul.2024.116591 - Available Online |
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Dr Tess McCann | |
Shrestha, R., McCann, T., Saravanan, H., Lieberth, J., Koirala, P., & Bloomekatz, J. (2023). The myocardium utilizes a platelet-derived growth factor receptor alpha (Pdgfra)-phosphoinositide 3-kinase (PI3K) signaling cascade to steer toward the midline during zebrafish heart tube formation.. eLife, 12, e85930. doi:10.7554/elife.85930 - Available Online |
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Professor Siobhán McClean | |
Quinn, C., Tomás-Cortázar, J., Ofioritse, O., Cosgrave, J., Purcell, C., McAloon, C., et al. (2023). Correction to: GlnH, a Novel Antigen That Offers Partial Protection against Verocytotoxigenic Escherichia coli Infection (Vaccines, (2023), 11, 1, (175), 10.3390/vaccines11010175). Vaccines, 11(9). doi:10.3390/vaccines11091414 - Available Online |
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Jenkins, H., MacLean, L., McClean, S., Cooke, G., Devereux, M., Howe, O., et al. (2023). Structural and solution speciation studies on selected [Cu(NN)(OO)] complexes and an investigation of their biomimetic activity, ROS generation and their cytotoxicity in normoxic, hypoxic and anoxic environments in MCF-7 breast cancer-derived cells. Journal of Inorganic Biochemistry, 249. doi:10.1016/j.jinorgbio.2023.112383 - Available Online |
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Tomás-Cortázar, J., Quinn, C., Corcoran, N., Blanco, A., Christensen, D., & McClean, S. (2024). BpOmpW antigen administered with CAF01 adjuvant stimulates comparable T cell responses to Sigma adjuvant system. Vaccine: X, 17. doi:10.1016/j.jvacx.2024.100438 - Available Online |
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Assoc Professor Margaret McGee | |
Sheridan, R., Brennan, K., Bazou, D., O’Gorman, P., Matallanas, D., & Mc Gee, M. M. (2024). Multiple Myeloma Derived Extracellular Vesicle Uptake by Monocyte Cells Stimulates IL-6 and MMP-9 Secretion and Promotes Cancer Cell Migration and Proliferation. Cancers, 16(5). doi:10.3390/cancers16051011 - Available Online |
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Professor Wim Meijer | |
Nolan, T. M., Sala-Comorera, L., Reynolds, L. J., Martin, N. A., Stephens, J. H., O'Hare, G. M. P., et al. (2023). Bacteriophages from faecal contamination are an important reservoir for AMR in aquatic environments. Science of the Total Environment, 900. doi:10.1016/j.scitotenv.2023.165490 - Available Online |
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Miranda-CasoLuengo, R., Yerlikaya, Z., Luo, H., Cheng, C., Blanco, A., Haas, A., & Meijer, W. G. (2024). The N-terminal domain is required for cell surface localisation of VapA, a member of the Vap family of Rhodococcus equi virulence proteins. PLoS ONE, 19(2 February). doi:10.1371/journal.pone.0298900 - Available Online |
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Gangneux, J. P., Brandao, J., Segal, E., Arikan-Akdagli, S., Barac, A., Bertout, S., et al. (2024). Knowledge and regulation on fungal contamination of sand and water: Progress report and perspectives. Medical Mycology, 62(2). doi:10.1093/mmy/myad137 - Available Online |
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Kirchhelle, C., Lipton, M. F., Nolan, T. M., Meijer, W. G., Saha, S., & Sankaran, N. (2024). Reuse, Repurpose, and Recycle: Bacteriophages and Microbial Surveillance (1921-2023). PHAGE: Therapy, Applications, and Research, 5(1), 14-21. doi:10.1089/phage.2023.0042 - Available Online |
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Nolan, T. M., Martin, N. A., Reynolds, L. J., Sala-Comorera, L., O'Hare, G. M. P., O'Sullivan, J. J., & Meijer, W. G. (2024). Agricultural and urban practices are correlated to changes in the resistome of riverine systems. Science of the Total Environment, 927. doi:10.1016/j.scitotenv.2024.172261 - Available Online |
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Martin, N. A., Reynolds, L. J., Sala-Comorera, L., Nolan, T. M., Stephens, J. H., Gitto, A., et al. (2024). Quantitative source apportionment of faecal indicator bacteria from anthropogenic and zoogenic sources of faecal contamination. Marine Pollution Bulletin, 205. doi:10.1016/j.marpolbul.2024.116591 - Available Online |
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Dr Raul Miranda Caso Luengo | |
Miranda-CasoLuengo, R., Yerlikaya, Z., Luo, H., Cheng, C., Blanco, A., Haas, A., & Meijer, W. G. (2024). The N-terminal domain is required for cell surface localisation of VapA, a member of the Vap family of Rhodococcus equi virulence proteins. PLoS ONE, 19(2 February). doi:10.1371/journal.pone.0298900 - Available Online |
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Dr Jennifer Mitchell | |
Drumm, S. D., Cormican, P., Owens, R. A., Mitchell, J., & Keane, O. M. (2023). Immunoproteomic analysis of the serum IgG response to cell wall-associated proteins of Staphylococcus aureus strains belonging to CC97 and CC151. Veterinary research, 54(1), 79. doi:10.1186/s13567-023-01212-7 - Available Online |
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Professor Cormac Murphy | |
Dobson, L. S., Zhang, Q., McKay, B. A., Oke, O., Isanbor, C., Khan, M. F., et al. (2023). Aryl (ß,ß',ß"-Trifluoro)-tert-butyl: A Candidate Motif for the Discovery of Bioactives. Organic Letters, 25(37), 6802-6807. doi:10.1021/acs.orglett.3c02236 - Available Online |
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Hof, C., Khan, M. F., & Murphy, C. D. (2023). Endogenous production of 2-phenylethanol by Cunninghamella echinulata inhibits biofilm growth of the fungus. Fungal Biology, 127(10-11), 1384-1388. doi:10.1016/j.funbio.2023.10.001 - Available Online |
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Hof, C., Khan, M. F., & Murphy, C. (2023). Endogenous production of 2-phenylethanol by Cunninghamella echinulata inhibits biofilm growth of the fungus. Fungal Biology, 127, 1384-1388. doi:10.1016/j.funbio.2023.10.001 - Available Online |
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Khan, M. F., Hof, C., Niemcová, P., & Murphy, C. D. (2023). Recent advances in fungal xenobiotic metabolism: enzymes and applications. World Journal of Microbiology and Biotechnology, 39(11). doi:10.1007/s11274-023-03737-7 - Available Online |
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Karamanis, P., Muldoon, J., Murphy, C. D., & Rubini, M. (2024). Total synthesis of antifungal lipopeptide iturin A analogues and evaluation of their bioactivity against F. graminearum. Journal of Peptide Science, 30(6). doi:10.1002/psc.3569 - Available Online |
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Murphy, C., Niemcova, P., O'Hagan, D., Tarui, A., Piscelli, B., Al-Maharik, N., et al. (2024). Synthesis and Analysis of (?, ?', ?'', - Trifluoro)neopentyl (TFNP) Aryl ethers as a Polar Aliphatic Motif. Chemistry - A European Journal. doi:10.1002/chem.202402532 - Available Online |
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Dr Tanja Narancic | |
Cerrone, F., Zhou, B., Mouren, A., Avérous, L., Conroy, S., Simpson, J. C., et al. (2023). Pseudomonas umsongensis GO16 as a platform for the in vivo synthesis of short and medium chain length polyhydroxyalkanoate blends. Bioresource Technology, 387. doi:10.1016/j.biortech.2023.129668 - Available Online |
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Kelly, S., Tham, J. L., McKeever, K., Dillon, E., O’Connell, D., Scholz, D., et al. (2024). Comprehensive Proteomics Analysis of Polyhydroxyalkanoate (PHA) Biology in Pseudomonas putida KT2440: The Outer Membrane Lipoprotein OprL is a Newly Identified Phasin. Molecular and Cellular Proteomics, 23(5). doi:10.1016/j.mcpro.2024.100765 - Available Online |
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Mr Kaushik Narasimhan | |
Comini, G., Kelly, R., Jarrin, S., Patton, T., Narasimhan, K., Pandit, A., et al. (2024). Survival and maturation of human induced pluripotent stem cell-derived dopaminergic progenitors in the parkinsonian rat brain is enhanced by transplantation in a neurotrophin-enriched hydrogel.. Journal of neural engineering, 21(2). doi:10.1088/1741-2552/ad33b2 - Available Online |
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Hakami, A., Narasimhan, K., Comini, G., Thiele, J., Werner, C., Dowd, E., & Newland, B. (2024). Cryogel microcarriers for sustained local delivery of growth factors to the brain.. Journal of controlled release : official journal of the Controlled Release Society, 369, 404-419. doi:10.1016/j.jconrel.2024.03.023 - Available Online |
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Patton, T., Comini, G., Narasimhan, K., Cairns, A. G., Ådén, J., Almqvist, F., et al. (2024). Intra-striatal infusion of the small molecule alpha-synuclein aggregator, FN075, does not enhance parkinsonism in a subclinical AAV-alpha-synuclein rat model.. The European journal of neuroscience, 60(6), 5234-5248. doi:10.1111/ejn.16493 - Available Online |
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Assoc Professor David O'Connell | |
Kelly, S., Tham, J. L., McKeever, K., Dillon, E., O’Connell, D., Scholz, D., et al. (2024). Comprehensive Proteomics Analysis of Polyhydroxyalkanoate (PHA) Biology in Pseudomonas putida KT2440: The Outer Membrane Lipoprotein OprL is a Newly Identified Phasin. Molecular and Cellular Proteomics, 23(5). doi:10.1016/j.mcpro.2024.100765 - Available Online |
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Lynch, C. D., Cerrone, F., O'Connor, K. E., & O'Connell, D. J. (2024). Feeding secondary fermentations with mammalian and fungal culture waste streams increases productivity and resource efficiency. RSC Sustainability, 2(6), 1868-1882. doi:10.1039/d3su00483j - Available Online |
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Murphy, L., Lynch, C., & O'Connell, D. J. (2024). Valorisation of Spent Yeast Fermentation Media through Compositional-Analysis-Directed Supplementation. Applied Microbiology, 4(2), 959-971. doi:10.3390/applmicrobiol4020065 - Available Online |
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Pajenda, S., Gerges, D., Wagner, L., O’Connell, D., Aiad, M., Imre, R., et al. (2024). Identification of Pathogenic Pathways for Recurrence of Focal Segmental Glomerulosclerosis after Kidney Transplantation. Diagnostics, 14(15). doi:10.3390/diagnostics14151591 - Available Online |
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Professor John O'Connor | |
Moreton, N., Puzio, M., McCormack, J., & O'Connor, J. J. (2023). The effects of prolyl hydroxylase inhibition during and post, hypoxia, oxygen glucose deprivation and oxidative stress, in isolated rat hippocampal slices. Brain Research Bulletin, 205. doi:10.1016/j.brainresbull.2023.110822 - Available Online |
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Matheoudakis, K., & O'Connor, J. J. (2024). Modulatory and protective effects of prolyl hydroxylase domain inhibitors in the central nervous system. Advances in Pharmacology. doi:10.1016/bs.apha.2024.10.006 - Available Online |
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Professor Kevin O'Connor | |
Cerrone, F., Zhou, B., Mouren, A., Avérous, L., Conroy, S., Simpson, J. C., et al. (2023). Pseudomonas umsongensis GO16 as a platform for the in vivo synthesis of short and medium chain length polyhydroxyalkanoate blends. Bioresource Technology, 387. doi:10.1016/j.biortech.2023.129668 - Available Online |
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Kacanski, M., Stelzer, F., Walsh, M., Kenny, S., O'Connor, K., & Neureiter, M. (2023). Pilot-scale production of mcl-PHA by Pseudomonas citronellolis using acetic acid as the sole carbon source. New Biotechnology, 78, 68-75. doi:10.1016/j.nbt.2023.10.003 - Available Online |
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Bruch, M., Sanchez-Velandia, J. E., Rodríguez-Pereira, J., Rich, M., Pearcy, N., Narancic, T., et al. (2024). Upcycling atmospheric CO<inf>2</inf> to polyhydroxyalkanoates via sequential chemo-biocatalytic processes. Green Chemistry. doi:10.1039/d4gc04228j - Available Online |
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Dias, K. M. M., Oliveira, C. H., Calderano, A. A., Rostagno, H. S., O’Connor, K. E., Davis, R., et al. (2024). Effects of Hydroxytyrosol Supplementation on Performance, Fat and Blood Parameters of Broiler Chickens. Animals, 14(1). doi:10.3390/ani14010119 - Available Online |
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Rubhara, T., Gaffey, J., Hunt, G., Murphy, F., O’Connor, K., Buckley, E., & Vergara, L. A. (2024). A Business Case for Climate Neutrality in Pasture-Based Dairy Production Systems in Ireland: Evidence from Farm Zero C. Sustainability (Switzerland), 16(3). doi:10.3390/su16031028 - Available Online |
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Dias, K. M. M., Oliveira, C. H., Calderano, A. A., Rostagno, H. S., Gomes, K. M., O’Connor, K. E., et al. (2024). Dietary Hydroxytyrosol Supplementation on Growth Performance, Gut Morphometry, and Oxidative and Inflammatory Status in LPS-Challenged Broilers. Animals, 14(6). doi:10.3390/ani14060871 - Available Online |
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Kelly, S., Tham, J. L., McKeever, K., Dillon, E., O’Connell, D., Scholz, D., et al. (2024). Comprehensive Proteomics Analysis of Polyhydroxyalkanoate (PHA) Biology in Pseudomonas putida KT2440: The Outer Membrane Lipoprotein OprL is a Newly Identified Phasin. Molecular and Cellular Proteomics, 23(5). doi:10.1016/j.mcpro.2024.100765 - Available Online |
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Lynch, C. D., Cerrone, F., O'Connor, K. E., & O'Connell, D. J. (2024). Feeding secondary fermentations with mammalian and fungal culture waste streams increases productivity and resource efficiency. RSC Sustainability, 2(6), 1868-1882. doi:10.1039/d3su00483j - Available Online |
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Assoc Professor Tadhg Ó'Cróinín | |
Zermeño-Pérez, D., Chouirfa, H., Rodriguez, B. J., Dürig, T., Duffy, P., & Cróinín, T. O. (2024). Bioresorbable Polyester Coatings with Antifouling and Antimicrobial Properties for Prevention of Biofilm Formation in Early Stage Infections on Ti6Al4V Hard-Tissue Implants. ACS Applied Bio Materials, 7(8), 5728-5739. doi:10.1021/acsabm.4c00832 - Available Online |
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Ms Eve O'Reilly | |
O’Reilly, E., Khalifa, K., Cosgrave, J., Azam, H., Prencipe, M., Simpson, J. C., et al. (2023). Cannabidiol Inhibits the Proliferation and Invasiveness of Prostate Cancer Cells. Journal of Natural Products, 86(9), 2151-2161. doi:10.1021/acs.jnatprod.3c00363 - Available Online |
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Assoc Professor Niamh O'Sullivan | |
Garcia-Pardo, M. E., Simpson, J. C., & O’Sullivan, N. C. (2024). An Automated Imaging-Based Screen for Genetic Modulators of ER Organisation in Cultured Human Cells. Cells, 13(7). doi:10.3390/cells13070577 - Available Online |
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Dr Maria Prencipe | |
O’Reilly, E., Khalifa, K., Cosgrave, J., Azam, H., Prencipe, M., Simpson, J. C., et al. (2023). Cannabidiol Inhibits the Proliferation and Invasiveness of Prostate Cancer Cells. Journal of Natural Products, 86(9), 2151-2161. doi:10.1021/acs.jnatprod.3c00363 - Available Online |
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Mr Sean Quinlan | |
Sanchez-Brualla, I., Ghosh, A., Gibatova, V. A., Quinlan, S., Witherspoon, E., Vicini, S., & Forcelli, P. A. (2023). Phenobarbital does not worsen outcomes of neonatal hypoxia on hippocampal LTP on rats.. Frontiers in neurology, 14, 1295934. doi:10.3389/fneur.2023.1295934 - Available Online |
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Ghosh, A., Quinlan, S., & Forcelli, P. A. (2024). Anti-seizure medication-induced developmental cell death in neonatal rats is unaltered by history of hypoxia.. Epilepsy research, 201, 107318. doi:10.1016/j.eplepsyres.2024.107318 - Available Online |
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Quinlan, S., Khan, T., McFall, D., Campos-Rodriguez, C., & Forcelli, P. A. (2024). Early life phenobarbital exposure dysregulates the hippocampal transcriptome.. Frontiers in pharmacology, 15, 1340691. doi:10.3389/fphar.2024.1340691 - Available Online |
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Quinlan, S., Witherspoon, E., & Forcelli, P. A. (2024). Padsevonil suppresses seizures without inducing cell death in neonatal rats.. Pharmacological reports : PR, 76(5), 1055-1066. doi:10.1007/s43440-024-00628-y - Available Online |
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Dr Jens Rauch | |
Iglesias-Martinez, L. F., Rauch, N., Wynne, K., McCann, B., Kolch, W., & Rauch, J. (2023). Interactome dynamics of RAF1-BRAF kinase monomers and dimers. Scientific Data, 10(1). doi:10.1038/s41597-023-02115-0 - Available Online |
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Dr Emmanuel Reynaud | |
Souza, A., Parnell, M., Rodriguez, B. J., & Reynaud, E. (2023). Role of pH and Crosslinking Ions on Cell Viability and Metabolic Activity in Alginate-gelatin 3D Prints. doi:10.20944/preprints202309.1086.v1 - Available Online |
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Souza, A., Parnell, M., Rodriguez, B. J., & Reynaud, E. G. (2023). Role of pH and Crosslinking Ions on Cell Viability and Metabolic Activity in Alginate–Gelatin 3D Prints. Gels, 9(11). doi:10.3390/gels9110853 - Available Online |
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Torres-Leguizamon, M., Favaro, J., Coello, D., Reynaud, E. G., Néfau, T., & Duplessy, C. (2023). Remote harm reduction services are key solutions to reduce the impact of COVID-19-like crises on people who use drugs: evidence from two independent structures in France and in the USA. Harm Reduction Journal, 20(1). doi:10.1186/s12954-023-00732-x - Available Online |
Reynaud, E. G., & Tomancák, P. (2024). Preface. Light Sheet Fluorescence Microscopy, xxi-xxii.
Singh, K., Wychowaniec, J. K., Edwards-Gayle, C. J. C., Reynaud, E. G., Rodriguez, B. J., & Brougham, D. F. (2024). Structure-dynamics correlations in composite PF127-PEG-based hydrogels; cohesive/hydrophobic interactions determine phase and rheology and identify the role of micelle concentration in controlling 3D extrusion printability. Journal of Colloid and Interface Science, 660, 302-313. doi:10.1016/j.jcis.2023.12.151
Burke, N., Müller, G., Saggiomo, V., Hassett, A. R., Mutterer, J., Ó Súilleabháin, P., et al. (2024). EnderScope: A low-cost 3D printer-based scanning microscope for microplastic detection. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 382(2274). doi:10.1098/rsta.2023.0214
Souza, A., Kevin, M., Rodriguez, B. J., & Reynaud, E. G. (2024). The use of fluid-phase 3D printing to pattern alginate-gelatin hydrogel properties to guide cell growth and behaviour in vitro. Biomedical Materials (Bristol), 19(4). doi:10.1088/1748-605X/ad51bf
Krupa, I., Treacy, N. J., Clerkin, S., Davis, J. L., Miller, A. F., Saiani, A., et al. (2024). Protocol for the Growth and Maturation of hiPSC-Derived Kidney Organoids using Mechanically Defined Hydrogels. Current Protocols, 4(7). doi:10.1002/cpz1.1096
- Available Online
Dr Julen Tomás Cortázar
Quinn, C., Tomás-Cortázar, J., Ofioritse, O., Cosgrave, J., Purcell, C., McAloon, C., et al. (2023). Correction to: GlnH, a Novel Antigen That Offers Partial Protection against Verocytotoxigenic Escherichia coli Infection (Vaccines, (2023), 11, 1, (175), 10.3390/vaccines11010175). Vaccines, 11(9). doi:10.3390/vaccines11091414
Tomás-Cortázar, J., Quinn, C., Corcoran, N., Blanco, A., Christensen, D., & McClean, S. (2024). BpOmpW antigen administered with CAF01 adjuvant stimulates comparable T cell responses to Sigma adjuvant system. Vaccine: X, 17. doi:10.1016/j.jvacx.2024.100438
- Available Online
Dr Leticia Villalba
de Diego-Garcia, L., Brennan, G. P., Auer, T., Menendez-Mendez, A., Parras, A., Martin-Gil, A., et al. (2023). CPEB4–CLOCK crosstalk during temporal lobe epilepsy. Epilepsia, 64(10), 2827-2840. doi:10.1111/epi.17736
- Available Online
Dr Luisa Weiss
Kelliher, S., Gamba, S., Weiss, L., Marchetti, M., Schieppati, F., Ní Áinle, F., et al. (2023). OC 56.1 Platelets as Versatile Effectors of Thromboinflammation: An MPN Multi-Omics Collaborative. Research and Practice in Thrombosis and Haemostasis, 7, 100485. doi:10.1016/j.rpth.2023.100485
Kenny, M., Shukla, R., Weiss, L., Fouhy, E., Murphy, C., Ní Áinle, F., et al. (2023). PB1520 Deep Learning Extracts Embedded Signatures Associated with Pregnancy and Preeclampsia from Circulating Vesicle Profiles. Research and Practice in Thrombosis and Haemostasis, 7, 101948. doi:10.1016/j.rpth.2023.101948
Weiss, L., Szklanna, P., Kelliher, S., Wynne, K., Blanco, A., O’Doherty, A., et al. (2023). OC 16.5 Rivaroxaban in Combination with Low-Dose Aspirin is Associated with a Reduction in Pro-Inflammatory and Pro-thrombotic Circulating Vesicle Signatures in Patients with Cardiovascular Disease. Research and Practice in Thrombosis and Haemostasis, 7, 100305. doi:10.1016/j.rpth.2023.100305
Weiss, L., Uhrig, W., Kelliher, S., Szklanna, P. B., Prendiville, T., Comer, S. P., et al. (2024). Proteomic analysis of extracellular vesicle cargoes mirror the cardioprotective effects of rivaroxaban in patients with venous thromboembolism. Proteomics - Clinical Applications, 18(4). doi:10.1002/prca.202300014
Kelliher, S., Gamba, S., Weiss, L., Shen, Z., Marchetti, M., Schieppati, F., et al. (2024). Platelet proteomic profiling reveals potential mediators of immunothrombosis and proteostasis in myeloproliferative neoplasms. Blood Advances, 8(16), 4276-4280. doi:10.1182/bloodadvances.2023012016
- Available Online
Dr Zeynep Yerlikaya
Miranda-CasoLuengo, R., Yerlikaya, Z., Luo, H., Cheng, C., Blanco, A., Haas, A., & Meijer, W. G. (2024). The N-terminal domain is required for cell surface localisation of VapA, a member of the Vap family of Rhodococcus equi virulence proteins. PLoS ONE, 19(2 February). doi:10.1371/journal.pone.0298900
Dr Despina Bazou | |
Tsallos, D., Ikonen, N., Miettinen, J. J., Majumder, M. M., Eldfors, S., Västrik, I., et al. (2024). Multi-omic and functional screening reveal targetable vulnerabilities in<i>TP53</i>mutated multiple myeloma. doi:10.1101/2024.08.23.24312359 - Available Online |
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Professor Oliver Blacque | |
Ahmed, M., Fischer, S., Robert, K., Lange, K., Stuck, M., Best, S., et al. (2024). Two functional forms of the Meckel-Gruber syndrome protein TMEM67 generated by proteolytic cleavage by ADAMTS9 mediate Wnt signaling and ciliogenesis. doi:10.1101/2024.09.04.611229 - Available Online |
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Professor Geraldine Butler | |
Bergin, S., Doorley, L. A., Rybak, J. M., Wolfe, K. H., Butler, G., Cuomo, C. A., & Rogers, P. D. (2023). Analysis of clinical<i>Candida parapsilosis</i>isolates reveals copy number variation in key fluconazole resistance genes. doi:10.1101/2023.12.13.571446 - Available Online |
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Lombardi, L., Salzberg, L., Cinnéide, E., O’Brien, C., Morio, F., Turner, S., et al. (2024). Alternative sulphur metabolism in the fungal pathogen Candida parapsilosis. doi:10.21203/rs.3.rs-3951443/v1 - Available Online |
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Dr Hilary Cassidy | |
Podlipec, R., Sebastijanovic, A., Cassidy, H., Han, L., Danielsen, P., Cotar, P., et al. (2024). Binucleated cell formation and oncogene expression after particulate matter exposure is preceded by microtubule disruption, dysregulated cell cycle, prolonged mitosis, and septin binding. doi:10.1101/2024.01.07.574515 - Available Online |
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Dr Colm Collins | |
Sanctuary, M. R., Hudacheck, C. L., Jones, A. J., Murphy, B. V., Welsh, N., Klawitter, J., et al. (2024). Priming lymphocyte responsiveness and differential T cell signaling in pediatric IBD patients with<i>Cannabis</i>use. doi:10.1101/2024.07.08.602495 - Available Online |
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Dr Rebecca Henry | |
Wu, J., Ritzel, R., Li, Y., Jiao, Y., Doran, S., Khan, N., et al. (2023). The brain-bone marrow axis: Implications for chronic traumatic brain injury and age-related neurodegeneration. doi:10.21203/rs.3.rs-3356007/v1 - Available Online |
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Ritzel, R., Li, Y., Jiao, Y., Doran, S., Khan, N., Henry, R., et al. (2023). The brain-bone marrow axis and its implications for chronic traumatic brain injury. doi:10.21203/rs.3.rs-3356007/v2 - Available Online |
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Dr Karen Lange | |
Ahmed, M., Fischer, S., Robert, K., Lange, K., Stuck, M., Best, S., et al. (2024). Two functional forms of the Meckel-Gruber syndrome protein TMEM67 generated by proteolytic cleavage by ADAMTS9 mediate Wnt signaling and ciliogenesis. doi:10.1101/2024.09.04.611229 - Available Online |
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Dr Lisa Lombardi | |
Lombardi, L., Salzberg, L., Cinnéide, E., O’Brien, C., Morio, F., Turner, S., et al. (2024). Alternative sulphur metabolism in the fungal pathogen Candida parapsilosis. doi:10.21203/rs.3.rs-3951443/v1 - Available Online |
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Professor Patricia Maguire | |
Macleod, H., Weiss, L., Kelliher, S., Kevane, B., Ní Áinle, F., & Maguire, P. B. (2023). The effect of UVA light/8-methoxypsoralen exposure used in Extracorporeal Photopheresis treatment on platelets and extracellular vesicles. doi:10.1101/2023.10.18.562996 - Available Online |
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Kelliher, S., Gamba, S., Weiss, L., Shen, Z., Marchetti, M., Schieppati, F., et al. (2023). Platelet proteo-transcriptomic profiling validates mediators of thrombosis and proteostasis in patients with myeloproliferative neoplasms. doi:10.1101/2023.10.23.563619 - Available Online |
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Weiss, L., Uhrig, W., Kelliher, S., Szklanna, P., Prendiville, T., Comer, S. P., et al. (2024). Proteomic Analysis of Extracellular Vesicle Cargoes Mirror the Cardioprotective Effects of Rivaroxaban in Patients with Venous Thromboembolism. doi:10.22541/au.170663639.97074800/v1 - Available Online |
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Professor Kevin O'Connor | |
Lynch, C., Cerrone, F., O’Connor, K. E., & O’Connell, D. J. (2023). Feeding secondary fermentations with mammalian and fungal culture waste streams increases productivity and resource efficiency. doi:10.1101/2023.10.17.562659 - Available Online |
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Dr Julen Tomás Cortázar | |
Byrne, J., Gu, L., Garcia Leon, A. A., Gaillard, C. M., Saini, G., Alalwan, D., et al. (2024). Robust and Persistent B Cell Responses Following Third-Dose SARS-CoV-2 Vaccine Determine Protection from SARS-CoV-2 Infection. doi:10.2139/ssrn.4828828 - Available Online |
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Dr Luisa Weiss | |
Macleod, H., Weiss, L., Kelliher, S., Kevane, B., Ní Áinle, F., & Maguire, P. B. (2023). The effect of UVA light/8-methoxypsoralen exposure used in Extracorporeal Photopheresis treatment on platelets and extracellular vesicles. doi:10.1101/2023.10.18.562996 - Available Online |
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Kelliher, S., Gamba, S., Weiss, L., Shen, Z., Marchetti, M., Schieppati, F., et al. (2023). Platelet proteo-transcriptomic profiling validates mediators of thrombosis and proteostasis in patients with myeloproliferative neoplasms. doi:10.1101/2023.10.23.563619 - Available Online |
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Weiss, L., Uhrig, W., Kelliher, S., Szklanna, P., Prendiville, T., Comer, S. P., et al. (2024). Proteomic Analysis of Extracellular Vesicle Cargoes Mirror the Cardioprotective Effects of Rivaroxaban in Patients with Venous Thromboembolism. doi:10.22541/au.170663639.97074800/v1 - Available Online |
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Dr Yan Yan | |
Ban, Z., Yan, Y., & Dawson, K. A. (2024). Unravelling biomolecular and community grammars of RNA granules via machine learning. doi:10.1101/2024.04.06.588388 - Available Online |
Professor Patricia Maguire | |
Maguire, P. (2023). The AI_PREMie project: Revolutionising Healthcare with AI. Online. |